Best TWAS P=2.58e-07 · Best GWAS P=8.61e-09 conditioned to 6.4e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | ARFGEF2 | 0.09 | 0.05 | lasso | 8 | 0.10 | 9.2e-13 | -5.1 | 5.2 | 2.6e-07 | -0.41 | 0.13 | 0.87 | TRUE |
| 2 | GTEx | Skin Sun Exposed Lower leg | ZFAS1 | 0.07 | 0.03 | enet | 14 | 0.05 | 5.8e-05 | -4.5 | -5.1 | 3.0e-07 | 0.55 | 0.49 | 0.34 | FALSE |