TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Weight
:
←
→
chr5:95,168,155-96,832,363
Best TWAS P=2.02e-10 · Best GWAS P=7.79e-15 conditioned to 4.44e-13
95.2M
95.4M
95.6M
95.8M
96M
96.2M
96.4M
96.6M
96.8M
0
5
10
15
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
GTEx
Liver
CAST
0.32
0.03
enet
23
0.12
4.4e-04
-4.7
-6.4
2.0e-10
-0.09
0.18
0.05
TRUE
3
GTEx
Esophagus Muscularis
ERAP1
0.19
0.06
enet
19
0.11
2.5e-07
-3.3
-5.5
3.9e-08
-0.04
0.97
0.00
FALSE
2
GTEx
Esophagus Gastroesophageal Junction
ERAP1
0.29
0.18
lasso
8
0.13
2.6e-05
-4.6
-5.4
5.3e-08
-0.01
0.57
0.03
FALSE
1
GTEx
Colon Transverse
ERAP1
0.44
0.28
lasso
11
0.31
2.2e-15
-4.6
-5.3
1.3e-07
-0.02
1.00
0.00
FALSE
5
GTEx
Lung
ERAP1
0.41
0.27
enet
37
0.37
3.2e-29
-4.6
-5.2
2.3e-07
-0.04
1.00
0.00
FALSE