4404 significantly associated models · 991 unique genes
.
# | chr | p0 | p1 | # assoc genes | # joint genes | best TWAS P | best SNP P | cond SNP P | % var exp | joint genes |
---|---|---|---|---|---|---|---|---|---|---|
1 | 1 | 752566 | 3191909 | 9 | 3 | 5.7e-10 | 1.1e-08 | 8.3e-03 | 79 | RP1-283E3.4 RP5-890O3.9 TNFRSF14 |
2 | 1 | 7392594 | 8878885 | 2 | 2 | 4.4e-09 | 2.1e-08 | 1.4e-03 | 68 | RP11-431K24.1 VAMP3 |
3 | 1 | 10391536 | 12013869 | 4 | 1 | 1.0e-15 | 3.0e-14 | 2.2e-01 | 97 | MTOR |
4 | 1 | 22712328 | 24201643 | 2 | 1 | 2.8e-10 | 3.3e-10 | 1.0e+00 | 100 | HTR1D |
5 | 1 | 31402148 | 34592020 | 10 | 6 | 1.8e-16 | 6.4e-16 | 1.0e+00 | 100 | BAI2 PEF1 PTP4A2 S100PBP TMEM54 ZNF362 |
6 | 1 | 39182130 | 40737589 | 6 | 1 | 4.6e-14 | 1.0e-14 | 2.6e-03 | 85 | PABPC4 |
7 | 1 | 40748755 | 43576321 | 5 | 3 | 1.2e-16 | 2.9e-16 | 9.6e-03 | 90 | HIVEP3 RIMKLA SCMH1 |
8 | 1 | 46982455 | 52135979 | 3 | 3 | 1.7e-13 | 1.1e-16 | 1.3e-05 | 72 | AGBL4 CDKN2C TAL1 |
9 | 1 | 61448835 | 63322743 | 2 | 1 | 5.7e-12 | 2.6e-12 | 1.2e-04 | 70 | TM2D1 |
10 | 1 | 66019891 | 67086881 | 1 | 1 | 1.1e-07 | 5.5e-10 | 1.0e-03 | 72 | PDE4B |
11 | 1 | 71163715 | 73435171 | 1 | 1 | 2.3e-14 | 2.1e-19 | 1.1e-09 | 54 | NEGR1 |
12 | 1 | 76862305 | 79699821 | 6 | 3 | 8.9e-17 | 5.1e-39 | 5.6e-20 | 51 | FAM73A GIPC2 PIGK |
13 | 1 | 85017326 | 87555358 | 5 | 3 | 1.4e-09 | 2.2e-09 | 9.6e-03 | 81 | C1orf52 ODF2L ZNHIT6 |
14 | 1 | 96492298 | 97978299 | 1 | 1 | 1.4e-07 | 7.4e-15 | 1.3e-09 | 39 | PTBP2 |
15 | 1 | 106906072 | 108296508 | 1 | 1 | 5.5e-10 | 6.1e-10 | 6.9e-11 | -11 | PRMT6 |
16 | 1 | 112312154 | 113743567 | 2 | 1 | 2.3e-07 | 4.1e-10 | 3.6e-10 | -1 | MOV10 |
17 | 2 | 15703 | 1384725 | 2 | 1 | 6.5e-12 | 2.2e-62 | 2.9e-53 | 15 | TMEM18 |
18 | 2 | 24348096 | 26068509 | 5 | 9 | 5.5e-18 | 2.9e-16 | NaN | NaN | ADCY3 EFR3B POMC RP11-443B20.1 |
19 | 2 | 26223547 | 29344127 | 12 | 4 | 4.0e-17 | 2.5e-16 | 1.0e+00 | 100 | FNDC4 KCNK3 PPP1CB RP11-373D23.3 |
20 | 2 | 35883253 | 37567226 | 5 | 1 | 2.3e-14 | 4.3e-14 | 1.2e-01 | 96 | FEZ2 |
21 | 2 | 53321216 | 55231928 | 4 | 1 | 1.0e-10 | 7.9e-10 | 1.6e-02 | 84 | ACYP2 |
22 | 2 | 55401562 | 56843605 | 1 | 1 | 5.4e-15 | 4.9e-17 | 2.5e-04 | 81 | EFEMP1 |
23 | 2 | 68925733 | 70360950 | 2 | 1 | 2.2e-08 | 2.6e-08 | 1.3e-02 | 80 | GFPT1 |
24 | 2 | 85083503 | 86513102 | 3 | 1 | 5.6e-09 | 2.9e-07 | 1.7e-01 | 93 | GGCX |
25 | 2 | 99468341 | 101731705 | 3 | 1 | 4.9e-12 | 7.4e-11 | 1.9e-01 | 96 | AFF3 |
26 | 2 | 111392259 | 112621199 | 1 | 1 | 5.6e-08 | 3.6e-08 | 1.0e+00 | 100 | BCL2L11 |
27 | 2 | 143190742 | 145209076 | 1 | 1 | 1.5e-09 | 9.3e-09 | 1.7e-02 | 83 | ARHGAP15 |
28 | 2 | 159129143 | 160782732 | 1 | 1 | 9.0e-08 | 3.7e-07 | 3.3e-03 | 67 | TANC1 |
29 | 3 | 9283299 | 10892469 | 11 | 1 | 1.2e-11 | 2.6e-08 | 1.6e-01 | 94 | CRELD1 |
30 | 3 | 33138549 | 34531898 | 1 | 1 | 8.6e-08 | 5.1e-08 | 1.0e-01 | 91 | RP11-10C24.2 |
31 | 3 | 40537829 | 41986787 | 1 | 1 | 2.0e-11 | 6.4e-12 | 5.2e-02 | 92 | CTNNB1 |
32 | 3 | 43996504 | 45398042 | 1 | 1 | 1.4e-07 | 3.8e-08 | 1.2e-07 | 7 | ZNF35 |
33 | 3 | 48702606 | 51043528 | 22 | 2 | 4.3e-32 | 2.7e-31 | 1.0e+00 | 100 | HYAL1 RBM6 |
34 | 3 | 56341514 | 56902096 | 1 | 1 | 1.8e-07 | 1.6e-06 | 2.8e-01 | 95 | CCDC66 |
35 | 3 | 61688122 | 63555399 | 1 | 1 | 1.1e-07 | 3.6e-09 | 1.9e-03 | 72 | CADPS |
36 | 3 | 84317575 | 86808226 | 1 | 2 | 6.9e-15 | 1.2e-17 | 3.1e-03 | 88 | CADM2 |
37 | 3 | 87495550 | 88911119 | 3 | 2 | 3.8e-13 | 4.2e-13 | 1.0e+00 | 100 | CGGBP1 ZNF654 |
38 | 3 | 93537290 | 94444980 | 4 | 1 | 1.1e-08 | 3.9e-16 | 8.2e-10 | 43 | STX19 |
39 | 3 | 107181540 | 108633112 | 1 | 1 | 2.0e-07 | 2.2e-09 | 5.6e-05 | 55 | IFT57 |
40 | 3 | 119254385 | 119778489 | 1 | 1 | 4.9e-09 | 7.1e-08 | 9.6e-03 | 77 | NR1I2 |
41 | 3 | 120799666 | 122252204 | 1 | 1 | 1.6e-07 | 5.0e-07 | 5.3e-01 | 98 | IQCB1 |
42 | 3 | 127889375 | 129714372 | 3 | 1 | 1.9e-14 | 2.7e-11 | 2.5e-02 | 89 | H1FX |
43 | 3 | 140350567 | 141867638 | 1 | 2 | 1.4e-56 | 7.1e-57 | 1.0e+00 | 100 | ZBTB38 |
44 | 3 | 153142317 | 154733231 | 3 | 1 | 4.7e-13 | 1.3e-11 | 5.2e-02 | 92 | ARHGEF26 |
45 | 3 | 169916919 | 172815740 | 2 | 2 | 8.1e-11 | 1.2e-11 | 4.4e-07 | 45 | EIF5A2 FNDC3B |
46 | 3 | 182655858 | 186072370 | 6 | 4 | 1.8e-14 | 4.8e-14 | 6.9e-03 | 87 | ETV5 KLHL24 PSMD2 SENP2 |
47 | 3 | 195279119 | 196855644 | 3 | 1 | 1.5e-10 | 3.1e-09 | 8.8e-02 | 92 | PCYT1A |
48 | 4 | 686563 | 2414668 | 2 | 2 | 4.5e-09 | 4.3e-10 | 3.0e-04 | 66 | CRIPAK TMEM129 |
49 | 4 | 17104059 | 18507692 | 2 | 1 | 1.3e-15 | 4.5e-15 | 1.8e-04 | 77 | DCAF16 |
50 | 4 | 37915462 | 39361551 | 2 | 1 | 4.4e-08 | 4.0e-08 | 8.1e-04 | 63 | AC021860.1 |
51 | 4 | 47802595 | 53598975 | 5 | 1 | 6.7e-11 | 1.0e-11 | 2.4e-02 | 89 | SGCB |
52 | 4 | 67642191 | 69098006 | 1 | 1 | 2.6e-07 | 1.2e-08 | 2.6e-06 | 32 | CENPC |
53 | 4 | 88762296 | 89397091 | 1 | 1 | 2.4e-07 | 4.2e-06 | 2.8e-02 | 77 | ABCG2 |
54 | 4 | 105598022 | 107092169 | 1 | 1 | 7.7e-10 | 1.0e-10 | 1.2e-02 | 85 | PPA2 |
55 | 4 | 122028784 | 123478716 | 3 | 1 | 6.2e-15 | 1.3e-10 | 7.9e-01 | 100 | CCNA2 |
56 | 4 | 139731065 | 140337056 | 1 | 1 | 1.5e-07 | 1.0e-06 | 3.9e-01 | 97 | ELF2 |
57 | 4 | 144882744 | 146788825 | 3 | 3 | 4.1e-28 | 3.3e-30 | 8.5e-01 | 100 | HHIP-AS1 OTUD4 |
58 | 5 | 12225 | 1051918 | 6 | 1 | 4.0e-09 | 3.6e-08 | 6.3e-01 | 99 | PDCD6 |
59 | 5 | 6016507 | 7454862 | 1 | 1 | 1.1e-07 | 3.0e-09 | 5.6e-03 | 78 | PAPD7 |
60 | 5 | 35407342 | 36848558 | 1 | 1 | 1.1e-07 | 1.2e-07 | 2.1e-07 | 4 | LMBRD2 |
61 | 5 | 42076094 | 44296986 | 4 | 3 | 2.1e-11 | 3.7e-11 | 1.0e+00 | 100 | CCDC152 MGC42105 NNT-AS1 |
62 | 5 | 73626450 | 75704085 | 9 | 6 | 2.3e-35 | 1.5e-37 | NaN | NaN | CTC-366B18.2 HMGCR POC5 POLK |
63 | 5 | 76597461 | 78753539 | 2 | 1 | 2.8e-21 | 9.1e-21 | 1.9e-02 | 94 | AP3B1 |
64 | 5 | 80012251 | 81746129 | 1 | 1 | 6.6e-12 | 9.1e-13 | 1.2e-03 | 80 | SSBP2 |
65 | 5 | 86867897 | 88677293 | 3 | 2 | 1.2e-14 | 1.6e-18 | 3.5e-04 | 83 | CTC-498M16.2 LINC00461 |
66 | 5 | 95168155 | 96832363 | 2 | 1 | 2.0e-10 | 7.8e-15 | 4.4e-13 | 13 | CAST |
67 | 5 | 111535501 | 112950045 | 1 | 1 | 1.2e-09 | 1.4e-10 | 1.4e-03 | 75 | REEP5 |
68 | 5 | 122045488 | 123432250 | 3 | 1 | 3.6e-16 | 5.1e-25 | 1.5e-10 | 62 | CEP120 |
69 | 5 | 129797129 | 132425049 | 10 | 2 | 3.0e-18 | 2.0e-14 | 3.0e-03 | 85 | C5orf56 HINT1 |
70 | 5 | 137141064 | 137763798 | 1 | 1 | 1.1e-07 | 2.6e-10 | 4.2e-04 | 69 | BRD8 |
71 | 5 | 138053059 | 140767031 | 8 | 2 | 5.0e-14 | 4.1e-19 | 9.9e-07 | 70 | CXXC5 WDR55 |
72 | 5 | 141958831 | 143510824 | 1 | 1 | 2.3e-09 | 2.6e-07 | 7.4e-02 | 88 | NR3C1 |
73 | 5 | 152677967 | 154117397 | 1 | 1 | 1.3e-09 | 7.9e-11 | 2.4e-07 | 37 | FAM114A2 |
74 | 5 | 170042369 | 170971863 | 1 | 1 | 4.3e-08 | 6.7e-13 | 3.9e-12 | 7 | RANBP17 |
75 | 6 | 25266147 | 26689223 | 4 | 1 | 3.2e-27 | 4.6e-45 | 2.3e-26 | 43 | U91328.19 |
76 | 6 | 33662667 | 36897763 | 14 | 13 | 1.3e-67 | 4.5e-68 | 1.0e+00 | 100 | C6orf106 DEF6 RPL10A RPS10 SNRPC SRPK1 UHRF1BP1 |
77 | 6 | 41005502 | 42934620 | 9 | 2 | 1.1e-18 | 1.3e-20 | 3.8e-06 | 75 | MED20 PRPH2 |
78 | 6 | 51230788 | 52198802 | 1 | 1 | 4.4e-08 | 7.8e-12 | 3.9e-05 | 64 | PKHD1 |
79 | 6 | 53184508 | 54821152 | 1 | 1 | 1.6e-07 | 1.8e-06 | 2.4e-02 | 78 | MLIP |
80 | 6 | 80120201 | 81763771 | 2 | 1 | 1.6e-10 | 1.7e-07 | 6.3e-03 | 73 | RP11-250B2.6 |
81 | 6 | 89108830 | 90520848 | 1 | 1 | 9.5e-08 | 3.2e-10 | 1.0e-05 | 51 | SRSF12 |
82 | 6 | 108183628 | 110844259 | 10 | 2 | 7.1e-19 | 7.7e-28 | 1.1e-11 | 61 | AK9 FOXO3 |
83 | 6 | 124741508 | 127355237 | 5 | 2 | 1.7e-15 | 1.7e-15 | 1.0e+00 | 100 | CENPW HEY2 |
84 | 6 | 129638583 | 131163098 | 2 | 1 | 8.4e-36 | 1.1e-32 | 1.2e-01 | 98 | L3MBTL3 |
85 | 6 | 131202709 | 132647962 | 1 | 1 | 1.9e-07 | 2.4e-07 | 3.1e-01 | 96 | MED23 |
86 | 6 | 141924760 | 143855272 | 2 | 1 | 1.4e-14 | 9.4e-16 | 1.0e+00 | 100 | GPR126 |
87 | 6 | 151743948 | 153655470 | 1 | 1 | 3.3e-09 | 3.7e-17 | 9.0e-13 | 28 | SYNE1 |
88 | 6 | 160071844 | 161571560 | 2 | 1 | 2.5e-12 | 1.8e-14 | 3.2e-05 | 71 | SLC22A3 |
89 | 7 | 2032803 | 3581391 | 2 | 1 | 3.4e-37 | 3.8e-34 | 8.1e-02 | 98 | AMZ1 |
90 | 7 | 5726022 | 7191181 | 3 | 2 | 4.9e-09 | 7.2e-11 | 4.7e-02 | 91 | DAGLB RAC1 |
91 | 7 | 43821453 | 45201045 | 2 | 1 | 1.9e-11 | 6.3e-11 | 2.3e-02 | 88 | PPIA |
92 | 7 | 49817957 | 51215365 | 1 | 1 | 2.5e-09 | 1.1e-11 | 3.3e-06 | 53 | FIGNL1 |
93 | 7 | 70996097 | 72122218 | 1 | 1 | 2.0e-07 | 7.2e-11 | 3.7e-05 | 60 | CALN1 |
94 | 7 | 72674074 | 75842792 | 11 | 3 | 1.7e-16 | 1.6e-15 | 6.4e-01 | 100 | MLXIPL NCF1 STAG3L1 |
95 | 7 | 75913086 | 78122616 | 10 | 11 | 1.7e-15 | 4.3e-12 | NaN | NaN | AC007000.12 DTX2P1-UPK3BP1-PMS2P11 GSAP PION RSBN1L RSBN1L-AS1 TMEM60 |
96 | 7 | 91142400 | 93160671 | 6 | 1 | 4.7e-35 | 4.4e-33 | 1.0e+00 | 100 | CDK6 |
97 | 7 | 149577591 | 151373542 | 2 | 2 | 8.7e-15 | 3.0e-22 | 7.0e-06 | 78 | GIMAP4 KCNH2 |
98 | 8 | 8092025 | 12973575 | 14 | 1 | 1.2e-10 | 1.2e-09 | 1.5e-02 | 84 | MSRA |
99 | 8 | 22428708 | 24125172 | 4 | 2 | 2.5e-11 | 7.2e-12 | 1.4e-01 | 95 | CHMP7 SLC25A37 |
100 | 8 | 56269387 | 57683880 | 2 | 1 | 2.2e-12 | 9.6e-25 | 7.0e-15 | 42 | RPS20 |
101 | 8 | 66645549 | 68096452 | 2 | 1 | 3.8e-08 | 2.9e-09 | 1.1e-03 | 70 | ADHFE1 |
102 | 8 | 94690786 | 96276292 | 3 | 1 | 4.0e-10 | 1.0e-10 | 2.0e-02 | 87 | KIAA1429 |
103 | 9 | 14857740 | 16758776 | 1 | 1 | 4.3e-12 | 5.3e-11 | 1.3e-02 | 86 | CCDC171 |
104 | 9 | 35112406 | 36507639 | 1 | 1 | 7.6e-08 | 2.5e-09 | 8.6e-03 | 81 | SPAG8 |
105 | 9 | 89888137 | 91281294 | 1 | 1 | 8.2e-10 | 4.9e-07 | 3.8e-03 | 67 | CDK20 |
106 | 9 | 93476005 | 94885207 | 1 | 1 | 9.9e-12 | 5.8e-12 | 1.0e+00 | 100 | NFIL3 |
107 | 9 | 102162230 | 103803109 | 2 | 1 | 1.7e-12 | 1.2e-12 | 1.0e+00 | 100 | TEX10 |
108 | 9 | 111080029 | 112581047 | 2 | 1 | 9.7e-09 | 1.6e-09 | 5.9e-04 | 68 | C9orf5 |
109 | 9 | 127329424 | 128824378 | 1 | 1 | 9.7e-08 | 8.0e-08 | 1.0e+00 | 100 | GAPVD1 |
110 | 9 | 130380101 | 131772389 | 1 | 1 | 1.6e-08 | 6.4e-06 | 1.5e-01 | 90 | RP11-339B21.13 |
111 | 10 | 20372032 | 22724472 | 3 | 2 | 1.4e-13 | 1.8e-15 | 1.8e-02 | 91 | MLLT10 NEBL |
112 | 10 | 33701628 | 35801633 | 1 | 1 | 6.9e-08 | 1.6e-08 | 5.7e-03 | 76 | PARD3 |
113 | 10 | 76465803 | 77867825 | 1 | 1 | 2.7e-07 | 1.6e-09 | 3.3e-09 | 4 | ZNF503-AS2 |
114 | 10 | 80894561 | 81417214 | 1 | 1 | 9.8e-08 | 1.8e-07 | 4.7e-07 | 7 | ZCCHC24 |
115 | 10 | 101548177 | 103493226 | 7 | 3 | 1.0e-20 | 1.4e-17 | 1.0e+00 | 100 | HIF1AN RP11-179B2.2 SFXN3 |
116 | 10 | 103527782 | 105647095 | 12 | 5 | 2.2e-12 | 2.2e-12 | 1.0e+00 | 100 | CYP17A1 CYP17A1-AS1 NT5C2 |
117 | 10 | 113511441 | 115276976 | 1 | 1 | 5.0e-08 | 2.3e-08 | 2.0e-04 | 56 | VTI1A |
118 | 10 | 117894117 | 119582073 | 3 | 1 | 4.6e-11 | 9.5e-12 | 1.0e+00 | 100 | KIAA1598 |
119 | 10 | 123438113 | 124889817 | 2 | 1 | 1.6e-12 | 5.5e-11 | 3.6e-01 | 98 | PLEKHA1 |
120 | 10 | 125739009 | 127174440 | 1 | 1 | 2.7e-09 | 6.9e-10 | 9.3e-10 | 2 | METTL10 |
121 | 10 | 130566749 | 132263732 | 1 | 1 | 6.1e-09 | 4.8e-08 | 1.0e-01 | 91 | MGMT |
122 | 10 | 133309117 | 135192153 | 3 | 2 | 1.7e-09 | 5.2e-10 | 1.0e+00 | 100 | DPYSL4 GPR123 |
123 | 11 | 198510 | 1534852 | 1 | 1 | 6.0e-08 | 1.1e-07 | 7.0e-03 | 74 | POLR2L |
124 | 11 | 8167222 | 9177083 | 2 | 2 | 8.3e-08 | 5.7e-12 | 7.8e-02 | 93 | ST5 STK33 |
125 | 11 | 13608389 | 15081335 | 1 | 1 | 8.6e-10 | 9.9e-10 | 4.5e-02 | 89 | RRAS2 |
126 | 11 | 26818083 | 29054545 | 4 | 5 | 7.5e-28 | 3.4e-37 | 8.6e-04 | 93 | BDNF-AS LIN7C METTL15 |
127 | 11 | 29646947 | 31288160 | 3 | 1 | 7.0e-13 | 7.8e-15 | 1.0e+00 | 100 | MPPED2 |
128 | 11 | 42881882 | 44607471 | 3 | 1 | 8.2e-21 | 6.1e-19 | 1.0e+00 | 100 | HSD17B12 |
129 | 11 | 46578400 | 48485877 | 5 | 2 | 9.7e-13 | 2.2e-15 | 1.7e-01 | 97 | FNBP4 MADD |
130 | 11 | 63295034 | 69703103 | 36 | 17 | 1.0e-23 | 1.0e-23 | 1.0e+00 | 100 | CCND1 CNIH2 CTD-3074O7.5 CTSW EFEMP2 FIBP IGHMBP2 KCNK7 PACS1 POLA2 RAD9A RPS6KB2 SAPS3 VEGFB |
131 | 11 | 118241995 | 120797604 | 5 | 3 | 5.8e-11 | 1.2e-09 | 7.4e-03 | 81 | HMBS NLRX1 OAF |
132 | 11 | 130038487 | 131476599 | 2 | 1 | 1.6e-08 | 1.6e-09 | 1.9e-02 | 85 | SNX19 |
133 | 12 | 327421 | 1795687 | 1 | 1 | 1.3e-08 | 1.8e-15 | 1.3e-09 | 42 | RAD52 |
134 | 12 | 21169707 | 21784041 | 1 | 1 | 1.6e-08 | 5.4e-07 | 5.7e-02 | 86 | SLCO1A2 |
135 | 12 | 27587038 | 29432481 | 2 | 1 | 1.0e-08 | 6.5e-09 | 1.6e-01 | 94 | RP11-967K21.1 |
136 | 12 | 31856332 | 33484385 | 1 | 1 | 1.8e-08 | 2.1e-06 | 2.1e-01 | 93 | FGD4 |
137 | 12 | 40884881 | 42664105 | 1 | 1 | 2.2e-07 | 7.3e-12 | 7.0e-06 | 57 | PDZRN4 |
138 | 12 | 46077695 | 47465082 | 1 | 1 | 4.5e-08 | 6.7e-10 | 3.9e-03 | 78 | SLC38A2 |
139 | 12 | 49569311 | 51256065 | 2 | 2 | 3.0e-22 | 1.4e-36 | 6.0e-08 | 82 | FAIM2 |
140 | 12 | 53075660 | 54539005 | 2 | 1 | 1.2e-08 | 6.1e-09 | 2.7e-03 | 73 | PRR13 |
141 | 12 | 55601472 | 57125879 | 8 | 5 | 1.1e-13 | 1.3e-12 | NaN | NaN | AC034102.1 ESYT1 RPS26 SUOX |
142 | 12 | 65930145 | 67328072 | 1 | 1 | 8.0e-08 | 4.5e-33 | 7.8e-27 | 20 | RBMS1P1 |
143 | 12 | 89116708 | 90682621 | 2 | 1 | 1.4e-09 | 1.6e-13 | 3.4e-08 | 44 | POC1B |
144 | 12 | 93165619 | 94589220 | 1 | 1 | 2.1e-09 | 4.3e-20 | 7.0e-13 | 39 | MRPL42 |
145 | 12 | 106649988 | 113517494 | 20 | 6 | 3.6e-11 | 2.4e-12 | 2.7e-02 | 90 | CUX2 HECTD4 IFT81 PRDM4 RP11-412D9.4 UBE3B |
146 | 12 | 121194565 | 125155900 | 25 | 13 | 6.1e-22 | 2.8e-27 | NaN | NaN | ABCB9 BCL7A CCDC62 CCDC92 GPR81 KDM2B MLXIP VPS33A WDR66 ZCCHC8 |
147 | 12 | 132613274 | 133778796 | 2 | 1 | 7.4e-09 | 2.4e-10 | 1.0e+00 | 100 | ZNF605 |
148 | 13 | 27300215 | 28717392 | 3 | 2 | 3.4e-11 | 5.3e-12 | 1.3e-01 | 95 | AL137059.1 GTF3A |
149 | 13 | 49557805 | 52109040 | 4 | 3 | 6.6e-13 | 3.9e-24 | 1.1e-10 | 60 | DLEU2 DLEU7 EBPL |
150 | 13 | 77787826 | 79931871 | 2 | 2 | 1.4e-07 | 1.3e-12 | 1.9e-09 | 28 | EDNRB RNF219 |
151 | 13 | 95632770 | 97402915 | 2 | 1 | 1.5e-08 | 1.5e-11 | 7.2e-05 | 65 | UGGT2 |
152 | 13 | 111270363 | 112552523 | 2 | 1 | 1.7e-09 | 3.1e-10 | 2.3e-05 | 55 | TEX29 |
153 | 13 | 114302502 | 115106996 | 2 | 1 | 6.8e-10 | 2.5e-08 | 5.1e-01 | 99 | CDC16 |
154 | 14 | 21250124 | 22662856 | 3 | 1 | 6.4e-12 | 1.0e-11 | 2.3e-01 | 97 | METTL3 |
155 | 14 | 24098631 | 25489283 | 1 | 1 | 3.4e-08 | 4.3e-08 | 1.6e-01 | 94 | ADCY4 |
156 | 14 | 35311272 | 35840678 | 1 | 1 | 2.3e-07 | 3.3e-07 | 2.2e-02 | 80 | PPP2R3C |
157 | 14 | 55888533 | 57466561 | 1 | 1 | 2.3e-07 | 4.6e-07 | 1.3e-01 | 91 | PELI2 |
158 | 14 | 59862624 | 61664530 | 2 | 2 | 4.1e-12 | 1.5e-23 | 8.8e-09 | 67 | C14orf39 PCNXL4 |
159 | 14 | 72695406 | 74192791 | 2 | 1 | 1.8e-09 | 3.5e-06 | 3.8e-01 | 96 | DCAF4 |
160 | 14 | 90643934 | 92390620 | 2 | 1 | 8.6e-11 | 5.3e-12 | 1.3e-02 | 87 | RPS6KA5 |
161 | 14 | 93011368 | 94495324 | 3 | 2 | 1.9e-11 | 1.7e-15 | 2.3e-04 | 79 | BTBD7 C14orf142 |
162 | 14 | 100551401 | 102019157 | 1 | 1 | 1.5e-07 | 1.5e-10 | 2.3e-04 | 67 | MEG3 |
163 | 14 | 102544860 | 104673221 | 2 | 2 | 1.0e-11 | 2.1e-15 | 6.5e-06 | 68 | CKB TRAF3 |
164 | 15 | 39530508 | 41012695 | 1 | 1 | 1.7e-08 | 1.3e-06 | 1.5e-04 | 39 | EIF2AK4 |
165 | 15 | 55002218 | 56408451 | 1 | 1 | 4.6e-10 | 2.0e-07 | 6.0e-01 | 99 | C15orf65 |
166 | 15 | 66662107 | 68789191 | 5 | 6 | 4.2e-15 | 9.6e-19 | NaN | NaN | IQCH MAP2K5 SMAD3 |
167 | 15 | 80293439 | 81737095 | 1 | 1 | 1.7e-09 | 6.3e-10 | 2.6e-02 | 87 | FAM108C1 |
168 | 15 | 84151637 | 85883064 | 9 | 4 | 5.9e-11 | 9.1e-12 | 3.0e-01 | 98 | AC103965.1 RP11-182J1.14 RP11-182J1.16 |
169 | 15 | 89171135 | 89674383 | 1 | 1 | 2.1e-07 | 2.7e-12 | 1.3e-07 | 43 | HAPLN3 |
170 | 15 | 99816860 | 101559136 | 1 | 1 | 1.7e-07 | 1.0e-06 | 6.0e-02 | 85 | ADAMTS17 |
171 | 16 | 86671 | 5766331 | 37 | 17 | 5.5e-25 | 5.0e-33 | NaN | NaN | C16orf79 CCDC78 HAGHL LMF1 LOC100134368 MRPL28 NARFL RP11-127I20.5 RP11-462G12.1 RP11-95P2.1 SLC9A3R2 UBN1 Z97634.3 ZNF500 |
172 | 16 | 8503222 | 9894522 | 1 | 1 | 2.4e-07 | 1.2e-09 | 8.8e-04 | 70 | RP11-473I1.10 |
173 | 16 | 14229099 | 15946778 | 6 | 1 | 2.3e-12 | 2.5e-08 | 5.4e-01 | 99 | PDXDC1 |
174 | 16 | 19178437 | 21147999 | 3 | 2 | 3.9e-12 | 4.3e-12 | 7.7e-08 | 40 | ACSM5 GPRC5B |
175 | 16 | 24162204 | 25620010 | 1 | 1 | 1.7e-15 | 4.3e-15 | 2.1e-04 | 78 | SLC5A11 |
176 | 16 | 27655848 | 31957368 | 84 | 14 | 4.1e-53 | 9.0e-45 | NaN | NaN | AC009133.12 ALDOA EIF3C EIF3CL MAPK3 MYST1 PPP4C RABEP2 SPNS1 SULT1A1 SULT1A2 TBX6 |
177 | 16 | 52772129 | 54846383 | 3 | 3 | 5.3e-46 | 1.4e-169 | 1.0e-78 | 54 | AKTIP FTO |
178 | 16 | 57799648 | 59241430 | 1 | 1 | 2.2e-07 | 2.8e-06 | 6.0e-02 | 84 | NDRG4 |
179 | 16 | 67423939 | 68953309 | 1 | 1 | 4.3e-08 | 3.8e-08 | 1.0e+00 | 100 | NFATC3 |
180 | 16 | 69454734 | 70978362 | 4 | 1 | 4.0e-09 | 2.1e-07 | 1.0e-03 | 60 | EXOSC6 |
181 | 16 | 71070698 | 72540539 | 2 | 1 | 4.6e-10 | 3.9e-12 | 1.3e-04 | 70 | PHLPP2 |
182 | 16 | 81485946 | 82901701 | 1 | 1 | 2.4e-09 | 1.5e-07 | 4.7e-01 | 98 | MPHOSPH6 |
183 | 16 | 88482758 | 90172696 | 4 | 3 | 4.5e-10 | 1.7e-09 | 8.5e-05 | 57 | CTD-2555A7.3 DBNDD1 RPL13 |
184 | 17 | 1717695 | 2453908 | 1 | 1 | 2.8e-07 | 4.6e-17 | 2.7e-16 | 5 | SMG6 |
185 | 17 | 3371501 | 6068117 | 7 | 2 | 1.0e-09 | 4.3e-09 | 1.0e+00 | 100 | RP11-810M2.2 RPAIN |
186 | 17 | 6644945 | 8041014 | 2 | 2 | 1.2e-07 | 3.8e-08 | 1.6e-08 | -6 | EIF5A RP11-104H15.8 |
187 | 17 | 15149905 | 16895160 | 4 | 1 | 1.1e-08 | 1.2e-07 | 5.9e-01 | 99 | PIGL |
188 | 17 | 27200734 | 30380381 | 14 | 7 | 5.5e-18 | 4.6e-22 | NaN | NaN | ABHD15 CTD-2349P21.5 GOSR1 RP11-848P1.7 TEFM |
189 | 17 | 34146026 | 35675511 | 6 | 1 | 3.7e-12 | 3.3e-11 | 2.6e-01 | 97 | GGNBP2 |
190 | 17 | 39993748 | 41538783 | 12 | 1 | 6.0e-11 | 3.1e-09 | 1.1e-01 | 93 | TUBG2 |
191 | 17 | 41946180 | 43332365 | 1 | 1 | 5.9e-08 | 7.4e-08 | 9.7e-04 | 62 | FZD2 |
192 | 17 | 43871147 | 43913030 | 1 | 1 | 4.0e-08 | 5.1e-05 | 5.7e-03 | 54 | KANSL1 |
193 | 17 | 44788310 | 47688526 | 14 | 2 | 4.1e-12 | 3.3e-14 | 6.7e-06 | 65 | CDK5RAP3 UBE2Z |
194 | 17 | 61008762 | 62694738 | 3 | 1 | 1.1e-12 | 3.5e-12 | 1.0e+00 | 100 | CD79B |
195 | 17 | 65123352 | 66885526 | 7 | 1 | 1.5e-18 | 5.4e-19 | 1.0e+00 | 100 | C17orf58 |
196 | 17 | 73059836 | 74456758 | 1 | 1 | 5.8e-08 | 9.7e-07 | 6.3e-02 | 86 | GALK1 |
197 | 17 | 75977988 | 77462467 | 2 | 1 | 9.0e-12 | 1.1e-11 | 1.0e+00 | 100 | USP36 |
198 | 17 | 77821891 | 79697383 | 3 | 2 | 2.0e-14 | 7.6e-14 | 8.2e-01 | 100 | BAIAP2 RPTOR |
199 | 18 | 20082830 | 21863589 | 6 | 7 | 3.7e-31 | 1.4e-26 | NaN | NaN | C18orf8 CABLES1 NPC1 TMEM241 |
200 | 18 | 39287420 | 39907414 | 1 | 1 | 2.2e-07 | 7.8e-09 | 1.0e+00 | 100 | PIK3C3 |
201 | 18 | 57349900 | 58729694 | 1 | 1 | 8.2e-31 | 4.1e-113 | 2.3e-85 | 25 | MC4R |
202 | 19 | 1127720 | 2560423 | 4 | 3 | 9.2e-13 | 3.6e-10 | 4.5e-01 | 99 | DOT1L REXO1 |
203 | 19 | 2660939 | 4159873 | 1 | 1 | 3.0e-07 | 5.3e-08 | 4.2e-04 | 58 | NFIC |
204 | 19 | 8367158 | 8848856 | 1 | 1 | 1.7e-08 | 5.8e-07 | 7.4e-04 | 54 | MYO1F |
205 | 19 | 9709433 | 11438022 | 4 | 3 | 3.0e-11 | 1.2e-11 | 7.7e-01 | 100 | CTD-2369P2.8 LOC147727 PDE4A |
206 | 19 | 17512412 | 19056153 | 4 | 1 | 6.8e-11 | 3.0e-12 | 1.0e+00 | 100 | MAST3 |
207 | 19 | 29606361 | 31013761 | 1 | 1 | 2.6e-23 | 1.6e-23 | 2.0e-02 | 95 | CCNE1 |
208 | 19 | 32650235 | 34691449 | 3 | 3 | 3.3e-09 | 1.3e-08 | 1.0e+00 | 100 | DPY19L3 KCTD15 PEPD |
209 | 19 | 38784917 | 40221643 | 2 | 1 | 5.7e-08 | 7.4e-07 | 1.4e-01 | 91 | FBXO27 |
210 | 19 | 45187302 | 46672822 | 2 | 2 | 7.4e-09 | 2.7e-23 | 9.7e-19 | 21 | APOC1P1 FOSB |
211 | 19 | 46923752 | 48406374 | 1 | 1 | 1.4e-10 | 1.3e-26 | 1.4e-17 | 36 | SAE1 |
212 | 19 | 48525507 | 50349958 | 3 | 2 | 6.5e-09 | 3.4e-07 | 8.7e-01 | 100 | RASIP1 SNRNP70 |
213 | 20 | 24230055 | 26182690 | 8 | 5 | 7.0e-14 | 3.7e-10 | NaN | NaN | ABHD12 ENTPD6 NINL PYGB |
214 | 20 | 31248879 | 36561882 | 45 | 10 | 2.2e-47 | 1.9e-53 | NaN | NaN | E2F1 ERGIC3 GGT7 MMP24 MROH8 NDRG3 TP53INP2 UQCC UQCC1 |
215 | 20 | 42816319 | 44279989 | 3 | 1 | 8.2e-14 | 4.1e-13 | 1.0e+00 | 100 | YWHAB |
216 | 20 | 49975801 | 52810143 | 2 | 1 | 1.6e-15 | 3.2e-20 | 4.6e-07 | 70 | ZFP64 |
217 | 20 | 62119121 | 62614338 | 1 | 1 | 1.8e-07 | 3.5e-07 | 1.0e+00 | 100 | LIME1 |
218 | 21 | 45583922 | 46988606 | 3 | 2 | 8.3e-09 | 1.9e-10 | 2.9e-02 | 88 | C21orf122 PTTG1IP |
219 | 22 | 17414103 | 18655860 | 2 | 1 | 3.4e-08 | 7.1e-08 | 7.3e-02 | 89 | BCL2L13 |
220 | 22 | 37781874 | 41004384 | 10 | 4 | 3.2e-09 | 1.7e-09 | 2.4e-02 | 86 | ADSL PLA2G6 SUN2 SYNGR1 |
221 | 22 | 41181586 | 42907619 | 3 | 1 | 4.8e-08 | 2.3e-09 | 7.5e-04 | 68 | ACO2 |
Trait | chisq ratio | # genes+ | # genes++ | % genes++ | corr | corr P | genes |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|---|---|---|---|
GTEx | Small Intestine Terminal Ileum | 15 | 3.3 | 6.3 |
GTEx | Ovary | 31 | 3.4 | 6.1 |
GTEx | Vagina | 22 | 3.5 | 6.1 |
GTEx | Prostate | 26 | 3.1 | 5.8 |
GTEx | Adipose Visceral Omentum | 72 | 3.5 | 5.7 |
GTEx | Brain Cerebellar Hemisphere | 62 | 4.2 | 5.7 |
GTEx | Spleen | 50 | 3.5 | 5.7 |
GTEx | Stomach | 42 | 2.9 | 5.7 |
ROSMAP | Brain Pre-frontal Cortex | 176 | 4.0 | 5.7 |
GTEx | Artery Tibial | 118 | 3.1 | 5.6 |
GTEx | Brain Cortex | 35 | 3.4 | 5.6 |
GTEx | Artery Aorta | 105 | 3.5 | 5.5 |
GTEx | Brain Cerebellum | 70 | 3.5 | 5.5 |
GTEx | Brain Frontal Cortex BA9 | 33 | 3.6 | 5.5 |
GTEx | Esophagus Gastroesophageal Junction | 53 | 3.7 | 5.5 |
GTEx | Adipose Subcutaneous | 119 | 3.4 | 5.4 |
GTEx | Breast Mammary Tissue | 66 | 3.3 | 5.4 |
GTEx | Cells EBV-transformed lymphocytes | 46 | 3.2 | 5.4 |
GTEx | Liver | 23 | 3.2 | 5.4 |
GTEx | Lung | 86 | 3.0 | 5.4 |
GTEx | Pituitary | 27 | 2.4 | 5.4 |
GTEx | Skin Not Sun Exposed Suprapubic | 87 | 3.5 | 5.4 |
GTEx | Skin Sun Exposed Lower leg | 128 | 3.5 | 5.4 |
GTEx | Brain Caudate basal ganglia | 27 | 2.9 | 5.3 |
GTEx | Colon Transverse | 62 | 3.0 | 5.3 |
GTEx | Esophagus Muscularis | 110 | 3.4 | 5.3 |
GTEx | Pancreas | 52 | 3.2 | 5.3 |
GTEx | Uterus | 21 | 3.7 | 5.3 |
GTEx | Whole Blood | 59 | 3.0 | 5.3 |
GTEx | Brain Nucleus accumbens basal ganglia | 26 | 3.0 | 5.2 |
GTEx | Brain Putamen basal ganglia | 18 | 2.9 | 5.2 |
GTEx | Breast Mammary Tissue (Female) | 46 | 2.8 | 5.2 |
GTEx | Esophagus Mucosa | 102 | 3.1 | 5.2 |
GTEx | Heart Atrial Appendage | 54 | 3.4 | 5.2 |
GTEx | Breast Mammary Tissue (Male) | 38 | 3.2 | 5.1 |
GTEx | Cells Transformed fibroblasts | 124 | 3.0 | 5.1 |
GTEx | Heart Left Ventricle | 46 | 3.0 | 5.1 |
GTEx | Muscle Skeletal | 93 | 3.2 | 5.1 |
GTEx | Nerve Tibial | 129 | 3.0 | 5.1 |
GTEx | Artery Coronary | 31 | 2.6 | 5.0 |
The Cancer Genome Atlas | Esophageal Carcinoma | 22 | 3.2 | 5.0 |
The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | 33 | 3.0 | 5.0 |
The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | 13 | 2.6 | 5.0 |
GTEx | Adrenal Gland | 42 | 2.9 | 4.9 |
GTEx | Testis | 97 | 3.1 | 4.9 |
GTEx | Thyroid | 120 | 3.0 | 4.9 |
GTEx | Colon Sigmoid | 35 | 2.4 | 4.8 |
The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | 25 | 2.3 | 4.8 |
GTEx | Brain Hypothalamus | 12 | 2.0 | 4.7 |
The Cancer Genome Atlas | Colon Adenocarcinoma | 57 | 2.8 | 4.7 |
The Cancer Genome Atlas | Glioblastoma Multiforme | 26 | 2.5 | 4.7 |
The Cancer Genome Atlas | Brain Lower Grade Glioma | 118 | 2.7 | 4.7 |
CommonMind | Brain Pre-frontal Cortex | 123 | 2.3 | 4.6 |
The Cancer Genome Atlas | Bladder Urothelial Carcinoma | 40 | 2.4 | 4.6 |
The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | 35 | 2.2 | 4.6 |
The Cancer Genome Atlas | Soft Tissue Sarcoma | 21 | 2.0 | 4.6 |
METSIM | Adipose | 118 | 2.6 | 4.5 |
The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | 62 | 2.3 | 4.5 |
The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | 97 | 2.4 | 4.5 |
The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | 27 | 2.0 | 4.5 |
The Cancer Genome Atlas | Prostate Adenocarcinoma | 101 | 2.2 | 4.5 |
The Cancer Genome Atlas | Stomach Adenocarcinoma | 29 | 1.7 | 4.5 |
The Cancer Genome Atlas | Testicular Germ Cell Tumors | 31 | 2.4 | 4.5 |
NTR | Blood | 49 | 2.0 | 4.4 |
The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | 37 | 1.8 | 4.4 |
The Cancer Genome Atlas | Lung Adenocarcinoma | 68 | 2.3 | 4.4 |
YFS | Blood | 109 | 2.4 | 4.3 |
The Cancer Genome Atlas | Breast Invasive Carcinoma | 95 | 2.2 | 4.3 |
The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | 52 | 2.1 | 4.3 |
The Cancer Genome Atlas | Skin Cutaneous Melanoma | 11 | 2.1 | 4.3 |
The Cancer Genome Atlas | Thyroid Carcinoma | 111 | 2.2 | 4.3 |
GTEx | Brain Hippocampus | 12 | 2.3 | 4.2 |
The Cancer Genome Atlas | Pancreatic Adenocarcinoma | 34 | 2.0 | 4.2 |
The Cancer Genome Atlas | Rectum Adenocarcinoma | 12 | 1.7 | 3.8 |