Best TWAS P=2.46e-07 · Best GWAS P=1.76e-07 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Soft Tissue Sarcoma | FOXP1 | 0.17 | 0.09 | lasso | 5 | 0.06 | 3e-04 | -5 | 5.2 | 2.5e-07 | -0.96 | 0.01 | 0.96 | TRUE |