Best TWAS P=3.83e-08 · Best GWAS P=1.36e-09 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Skin Not Sun Exposed Suprapubic | DLG2 | 0.12 | 0.06 | lasso | 7 | 0.07 | 1.3e-04 | -4.4 | -5.3 | 1.4e-07 | 0.92 | 0.04 | 0.95 | FALSE |
2 | GTEx | Skin Sun Exposed Lower leg | DLG2 | 0.14 | 0.12 | lasso | 3 | 0.12 | 9.8e-10 | -5.1 | -5.3 | 1.2e-07 | 0.90 | 0.06 | 0.94 | FALSE |
3 | GTEx | Skin Sun Exposed Lower leg | AP003026.1 | 0.04 | 0.04 | lasso | 2 | 0.03 | 2.1e-03 | -5.1 | -5.5 | 3.8e-08 | 0.96 | 0.03 | 0.92 | TRUE |