TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Whole body fat mass
:
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chr10:87,114,668-88,375,496
Best TWAS P=3.57e-08 · Best GWAS P=1.29e-09 conditioned to 4.2e-05
87.2M
87.4M
87.6M
87.8M
88M
88.2M
88.4M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Breast Invasive Carcinoma
GRID1
0.09
0.04
lasso
9
0.03
2.1e-07
-5.2
-5.5
3.6e-08
-0.43
0.16
0.83
TRUE
2
The Cancer Genome Atlas
Lung Squamous Cell Carcinoma
GRID1
0.07
0.03
lasso
4
0.02
9.7e-04
-5.2
-5.3
1.4e-07
-0.37
0.05
0.90
FALSE