TWAS
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Traits
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Traits
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Whole body fat-free mass
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chr21:38,835,811-40,373,763
Best TWAS P=1.24e-09 · Best GWAS P=2.81e-18 conditioned to 3.85e-10
38.8M
39M
39.2M
39.4M
39.6M
39.8M
40M
40.2M
40.4M
0
5
10
15
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
The Cancer Genome Atlas
Testicular Germ Cell Tumors
DSCR10
0.07
0.03
blup
35
0.06
3.0e-03
5.2
-6.1
1.2e-09
0.67
0.02
0.65
TRUE
1
METSIM
Adipose
KCNJ15
0.05
0.03
lasso
5
0.02
6.8e-04
-5.8
6.0
2.5e-09
-0.65
0.82
0.12
FALSE
2
NTR
Blood
KCNJ15
0.06
0.09
lasso
4
0.09
7.0e-27
-5.7
5.7
1.3e-08
-0.65
1.00
0.00
FALSE
3
YFS
Blood
KCNJ15
0.22
0.29
enet
19
0.30
3.9e-100
-5.8
5.7
1.3e-08
-0.66
1.00
0.00
FALSE