Best TWAS P=1.77e-08 · Best GWAS P=4.14e-06 conditioned to 7.98e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | CBR1 | 0.25 | 0.12 | enet | 29 | 0.20 | 9.5e-24 | -4.4 | -5.3 | 1.1e-07 | 0.00 | 0.02 | 0.92 | TRUE |
| 2 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | DOPEY2 | 0.05 | 0.01 | blup | 115 | 0.02 | 5.6e-03 | -3.6 | -5.1 | 2.6e-07 | -0.13 | 0.01 | 0.05 | TRUE |
| 3 | The Cancer Genome Atlas | Colon Adenocarcinoma | CBR1 | 0.45 | 0.09 | lasso | 5 | 0.22 | 5.1e-13 | 2.9 | -5.6 | 1.8e-08 | 0.00 | 0.02 | 0.86 | TRUE |