Best TWAS P=2.44e-08 · Best GWAS P=1.42e-07 conditioned to 0.000466
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | KY | 0.10 | 0.09 | bslmm | 499 | 0.10 | 7.5e-12 | -3.1 | -5.6 | 2.4e-08 | -0.36 | 0.71 | 0.04 | TRUE |
| 2 | The Cancer Genome Atlas | Glioblastoma Multiforme | ANAPC13 | 0.24 | 0.09 | lasso | 12 | 0.08 | 1.8e-03 | -3.7 | 5.1 | 3.0e-07 | 0.70 | 0.03 | 0.34 | FALSE |