[Hub]/) : Traits : Whole body fat-free mass :

chr4:151,347,355-153,373,680

Best TWAS P=1.25e-12 · Best GWAS P=2.81e-10 conditioned to 0.301

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex FAM160A1 0.04 0.04 blup 436 0.06 1.8e-07 -3.8 5.9 4.5e-09 -0.63 0.79 0.20 FALSE
2 GTEx Brain Cerebellar Hemisphere SH3D19 0.28 0.22 lasso 5 0.20 9.3e-06 6.2 -6.1 1.1e-09 0.80 0.03 0.96 FALSE
3 GTEx Brain Cerebellar Hemisphere RP11-164P12.3 0.19 0.05 enet 20 0.02 8.8e-02 6.2 5.3 1.1e-07 -0.73 0.03 0.90 FALSE
4 GTEx Brain Cerebellar Hemisphere RP11-164P12.4 0.47 0.44 enet 18 0.35 6.6e-10 6.1 6.2 7.0e-10 -0.81 0.03 0.97 FALSE
5 GTEx Brain Cerebellum RP11-164P12.4 0.48 0.40 lasso 17 0.49 2.2e-16 -4.5 5.2 2.1e-07 -0.66 0.04 0.96 FALSE
6 GTEx Colon Sigmoid PET112 0.13 0.08 enet 18 0.03 2.6e-02 -4.1 5.9 3.6e-09 -0.69 0.19 0.58 FALSE
7 GTEx Spleen RP11-164P12.4 0.36 0.26 lasso 10 0.20 5.8e-06 6.2 6.2 5.6e-10 -0.82 0.03 0.96 FALSE
8 NTR Blood FAM160A1 0.03 0.02 enet 26 0.02 1.4e-07 -6.2 7.1 1.2e-12 -0.94 0.02 0.98 TRUE
9 The Cancer Genome Atlas Breast Invasive Carcinoma FAM160A1 0.04 0.02 blup 99 0.02 1.2e-05 6.2 6.3 3.5e-10 -0.91 0.03 0.97 FALSE
10 The Cancer Genome Atlas Colon Adenocarcinoma FAM160A1 0.06 0.05 lasso 3 0.04 1.8e-03 -6.2 6.1 8.7e-10 -0.97 0.03 0.80 FALSE
11 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma FAM160A1 0.07 0.03 lasso 3 0.05 1.9e-04 -6.3 5.3 1.4e-07 -0.88 0.03 0.94 FALSE
12 The Cancer Genome Atlas Pancreatic Adenocarcinoma FAM160A1 0.08 0.05 blup 99 0.05 2.9e-03 -4.8 6.0 2.4e-09 -0.90 0.04 0.70 FALSE
13 The Cancer Genome Atlas Prostate Adenocarcinoma FAM160A1 0.09 0.10 lasso 2 0.10 3.3e-10 5.9 6.0 2.2e-09 -0.76 0.04 0.96 FALSE
14 The Cancer Genome Atlas Uterine Corpus Endometrial Carcinoma FAM160A1 0.16 0.14 enet 33 0.11 6.6e-04 6.1 6.0 1.9e-09 -0.83 0.04 0.95 FALSE