Best TWAS P=6.66e-37 · Best GWAS P=1.33e-45 conditioned to 0.631
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | OTUD4 | 0.06 | 0.04 | bslmm | 272 | 0.04 | 2.6e-05 | -11.1 | -8.8 | 1.2e-18 | -0.39 | 0.49 | 0.44 | FALSE |
| 2 | GTEx | Brain Hypothalamus | HHIP-AS1 | 0.12 | 0.02 | enet | 16 | 0.04 | 4.6e-02 | 9.3 | 9.4 | 6.9e-21 | 0.21 | 0.06 | 0.24 | TRUE |
| 3 | GTEx | Pancreas | ANAPC10 | 0.14 | 0.10 | lasso | 3 | 0.10 | 4.3e-05 | -12.5 | 12.2 | 1.9e-34 | 0.60 | 0.33 | 0.10 | TRUE |
| 4 | ROSMAP | Brain Pre-frontal Cortex | OTUD4 | 0.04 | 0.03 | lasso | 2 | 0.03 | 1.4e-04 | 12.5 | -12.7 | 6.7e-37 | -0.85 | 0.15 | 0.78 | TRUE |