Best TWAS P=1.59e-08 · Best GWAS P=8.26e-09 conditioned to 0.858
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | BTBD8 | 0.06 | 0.00 | bslmm | 441 | 0.02 | 1.3e-03 | 3.1 | -5.7 | 1.6e-08 | -0.23 | 0.00 | 0.01 | TRUE |
2 | The Cancer Genome Atlas | Thyroid Carcinoma | FAM69A | 0.25 | 0.06 | lasso | 4 | 0.05 | 1.2e-05 | 5.4 | 5.5 | 4.9e-08 | 0.84 | 0.02 | 0.98 | TRUE |