Best TWAS P=8.28e-15 · Best GWAS P=3.04e-12 conditioned to 0.578
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adipose Visceral Omentum | NLRX1 | 0.14 | 0.03 | lasso | 5 | 0.03 | 9.6e-03 | 6.9 | -7.8 | 8.3e-15 | -0.93 | 0.01 | 0.96 | TRUE |
2 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | NLRX1 | 0.05 | 0.03 | enet | 5 | 0.05 | 2.4e-06 | 3.9 | -5.2 | 2.7e-07 | -0.13 | 0.02 | 0.45 | FALSE |