Best TWAS P=1.58e-08 · Best GWAS P=4.29e-10 conditioned to 0.00691
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Artery Tibial | RP4-773A18.4 | 0.10 | 0.03 | enet | 16 | 0.04 | 2.6e-04 | 6.24 | -5.7 | 1.6e-08 | -0.87 | 0.00 | 1.00 | TRUE |
| 2 | GTEx | Thyroid | RP4-773A18.4 | 0.17 | 0.03 | lasso | 6 | 0.11 | 5.8e-09 | 4.15 | -5.3 | 9.7e-08 | -0.70 | 0.03 | 0.97 | FALSE |
| 3 | METSIM | Adipose | RP5-836N10.1 | 0.04 | 0.00 | bslmm | 695 | 0.01 | 1.7e-02 | 0.47 | 5.1 | 2.8e-07 | 0.64 | 0.01 | 0.97 | FALSE |