TWAS
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Models
Genes
Traits
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Traits
:
Impedance of leg (right)
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chr1:118,878,656-120,380,990
Best TWAS P=1.86e-11 · Best GWAS P=7.03e-15 conditioned to 0.299
118.8M
119M
119.2M
119.4M
119.6M
119.8M
120M
120.2M
120.4M
0
5
10
15
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
The Cancer Genome Atlas
Prostate Adenocarcinoma
TBX15
0.07
0.02
blup
92
0.05
2.2e-06
6.8
6.7
1.9e-11
-0.67
0.10
0.89
TRUE
3
GTEx
Testis
WARS2
0.25
0.17
lasso
3
0.17
4.3e-08
5.1
5.8
5.4e-09
-0.46
0.83
0.08
TRUE
2
GTEx
Brain Nucleus accumbens basal ganglia
WARS2
0.40
0.18
enet
10
0.23
9.2e-07
4.1
-5.2
1.5e-07
0.79
0.01
0.96
FALSE
1
GTEx
Brain Hypothalamus
WARS2
0.28
0.15
enet
13
0.25
1.1e-06
2.1
-5.2
2.1e-07
0.84
0.02
0.96
FALSE