TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Impedance of leg (right)
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chr4:100,039,953-101,562,813
Best TWAS P=3.55e-09 · Best GWAS P=1.1e-08 conditioned to 0.0792
100M
100.2M
100.4M
100.6M
100.8M
101M
101.2M
101.4M
101.6M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
GTEx
Whole Blood
DAPP1
0.06
0.03
enet
15
0.01
1.8e-02
2.6
5.9
3.5e-09
-0.27
0.18
0.44
TRUE
5
The Cancer Genome Atlas
Breast Invasive Carcinoma
DNAJB14
0.03
0.01
lasso
4
0.01
1.8e-03
-5.7
-5.6
1.8e-08
0.93
0.00
0.98
TRUE
3
GTEx
Artery Tibial
DNAJB14
0.11
0.01
enet
15
0.05
1.2e-04
-5.5
-5.5
3.0e-08
0.75
0.02
0.96
FALSE
1
GTEx
Adrenal Gland
DNAJB14
0.24
0.18
lasso
4
0.14
1.4e-05
-5.6
-5.4
7.5e-08
0.97
0.00
0.99
FALSE
2
GTEx
Artery Aorta
DNAJB14
0.24
0.01
lasso
13
0.09
8.1e-06
-2.9
-5.3
1.2e-07
0.82
0.02
0.97
FALSE