Best TWAS P=7.58e-08 · Best GWAS P=1.77e-08 conditioned to 0.0389
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Breast Invasive Carcinoma | ATP6AP1L | 0.13 | 0.17 | blup | 66 | 0.16 | 2.0e-32 | 4.5 | 5.2 | 2.6e-07 | 0.74 | 0.41 | 0.58 | FALSE |
| 2 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | ATP6AP1L | 0.20 | 0.29 | enet | 17 | 0.30 | 8.1e-18 | 4.6 | 5.3 | 1.1e-07 | 0.82 | 0.37 | 0.62 | FALSE |
| 3 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | ATP6AP1L | 0.26 | 0.16 | blup | 66 | 0.22 | 1.9e-08 | 4.7 | 5.4 | 7.6e-08 | 0.84 | 0.17 | 0.82 | TRUE |