Best TWAS P=1.76e-08 · Best GWAS P=5.28e-09 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Adipose Visceral Omentum | NT5DC3 | 0.21 | 0.00 | enet | 30 | 0.09 | 3.1e-05 | -0.22 | 5.1 | 2.9e-07 | -0.38 | 0.07 | 0.66 | FALSE |
| 2 | The Cancer Genome Atlas | Colon Adenocarcinoma | STAB2 | 0.13 | 0.10 | lasso | 5 | 0.08 | 1.5e-05 | -5.84 | -5.6 | 1.9e-08 | 0.99 | 0.01 | 0.99 | FALSE |
| 3 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | STAB2 | 0.17 | 0.12 | lasso | 5 | 0.11 | 2.0e-12 | -5.76 | -5.6 | 1.8e-08 | 0.99 | 0.01 | 0.99 | TRUE |