Best TWAS P=6.59e-08 · Best GWAS P=1.47e-08 conditioned to 0.00307
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Testis | RPN1 | 0.30 | 0.15 | enet | 22 | 0.15 | 2.8e-07 | 4.5 | 5.2 | 1.8e-07 | 0.81 | 0.06 | 0.94 | FALSE |
| 2 | GTEx | Thyroid | RPN1 | 0.16 | 0.04 | lasso | 3 | 0.08 | 1.0e-06 | 4.6 | 5.4 | 6.6e-08 | 0.62 | 0.26 | 0.72 | TRUE |