TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Impedance of leg (left)
:
←
→
chr3:135,842,507-137,261,517
Best TWAS P=5.6e-09 · Best GWAS P=2.05e-08 conditioned to 0.28
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Artery Coronary
SLC35G2
0.16
0.03
lasso
8
0.05
6.4e-03
-5.3
5.8
5.6e-09
-0.87
0.07
0.69
TRUE
3
GTEx
Thyroid
RP11-85F14.5
0.07
0.00
lasso
7
0.01
4.7e-02
3.9
-5.8
8.0e-09
0.57
0.10
0.28
FALSE
2
GTEx
Cells Transformed fibroblasts
RP11-85F14.5
0.10
0.08
enet
38
0.09
3.9e-07
2.9
-5.1
2.8e-07
0.61
0.88
0.10
FALSE