Best TWAS P=1.74e-07 · Best GWAS P=4.73e-08 conditioned to 0.0376
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | ATP6AP1L | 0.20 | 0.29 | enet | 17 | 0.30 | 8.1e-18 | 4.6 | 5.2 | 2.3e-07 | 0.82 | 0.15 | 0.84 | FALSE |
| 2 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | ATP6AP1L | 0.26 | 0.16 | blup | 66 | 0.22 | 1.9e-08 | 4.7 | 5.2 | 1.7e-07 | 0.82 | 0.10 | 0.89 | TRUE |