Best TWAS P=7.3e-08 · Best GWAS P=1.13e-07 conditioned to 4.86e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | EIF5A | 0.10 | 0.02 | blup | 51 | 0.06 | 5.5e-04 | 3.7 | -5.4 | 7.3e-08 | -0.26 | 0.00 | 0.18 | TRUE |
| 2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C17orf81 | 0.04 | 0.05 | enet | 8 | 0.04 | 1.2e-05 | -3.1 | -5.2 | 1.7e-07 | -0.67 | 0.03 | 0.23 | FALSE |