Best TWAS P=2.94e-07 · Best GWAS P=5.28e-07 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | IGFBP2 | 0.09 | 0.04 | enet | 14 | 0.05 | 4.8e-07 | 5 | 5.1 | 3.1e-07 | 0.91 | 0 | 0.99 | FALSE |
| 2 | GTEx | Skin Not Sun Exposed Suprapubic | SMARCAL1 | 0.13 | 0.13 | lasso | 2 | 0.11 | 1.3e-06 | 5 | -5.1 | 2.9e-07 | -0.99 | 0 | 0.99 | TRUE |