[Hub]/) : Traits : Leg fat-free mass (right) : ← →

chr11:26,818,083-29,054,545

Best TWAS P=9.2e-21 · Best GWAS P=5.19e-26 conditioned to 3.14e-08

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous LIN7C 0.08 0.06 lasso 1 0.04 4.1e-04 8.73 8.7 2.5e-18 0.63 0.74 0.14 FALSE
2 GTEx Brain Putamen basal ganglia BDNF-AS 0.22 0.17 lasso 4 0.13 5.5e-04 -4.03 5.3 1.4e-07 0.33 0.23 0.05 FALSE
3 GTEx Cells Transformed fibroblasts LIN7C 0.26 0.22 lasso 6 0.25 1.4e-18 8.73 7.7 1.5e-14 0.62 1.00 0.00 FALSE
4 GTEx Esophagus Muscularis LIN7C 0.14 0.08 enet 11 0.07 5.4e-05 4.16 6.8 8.4e-12 0.60 0.67 0.18 FALSE
5 GTEx Liver METTL15 0.18 0.05 lasso 3 0.09 1.9e-03 -0.58 -6.3 2.7e-10 -0.68 0.02 0.83 FALSE
6 GTEx Nerve Tibial LIN7C 0.18 0.08 enet 27 0.12 4.2e-09 8.73 6.8 1.0e-11 0.56 0.61 0.36 FALSE
7 GTEx Thyroid LIN7C 0.08 0.04 lasso 4 0.04 6.0e-04 8.73 8.8 1.4e-18 0.69 0.51 0.38 FALSE
8 NTR Blood LIN7C 0.01 0.00 lasso 3 0.01 2.2e-03 9.56 -9.3 9.2e-21 -0.72 0.10 0.81 TRUE
9 The Cancer Genome Atlas Bladder Urothelial Carcinoma LIN7C 0.04 0.01 lasso 3 0.02 1.0e-02 -1.82 5.4 6.3e-08 0.46 0.02 0.85 FALSE
10 The Cancer Genome Atlas Colon Adenocarcinoma LIN7C 0.10 0.03 blup 32 0.08 2.8e-05 9.04 6.8 1.3e-11 0.57 0.01 0.95 FALSE
11 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma LIN7C 0.05 0.02 lasso 3 0.03 2.9e-04 9.08 8.5 2.3e-17 0.63 0.00 0.98 FALSE
12 The Cancer Genome Atlas Brain Lower Grade Glioma LIN7C 0.09 0.12 lasso 2 0.12 2.6e-13 4.15 5.9 3.7e-09 0.52 0.93 0.07 FALSE
13 The Cancer Genome Atlas Thyroid Carcinoma LIN7C 0.09 0.10 enet 7 0.09 8.1e-09 4.15 5.1 2.7e-07 0.48 0.87 0.13 FALSE