Best TWAS P=6.39e-08 · Best GWAS P=4.96e-07 conditioned to 0.0121
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | MAP4K5 | 0.07 | 0 | blup | 63 | 0.02 | 0.0013 | -0.95 | 5.4 | 6.4e-08 | -0.54 | 0 | 0.77 | TRUE |