Best TWAS P=4.1e-09 · Best GWAS P=3.68e-10 conditioned to 0.000164
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Breast Mammary Tissue | RPS26 | 0.29 | 0.05 | enet | 37 | 0.12 | 9.4e-07 | -4.2 | -5.7 | 1.2e-08 | 0.52 | 0.85 | 0.13 | FALSE |
2 | GTEx | Breast Mammary Tissue (Female) | RPS26 | 0.20 | 0.11 | lasso | 3 | 0.10 | 6.6e-04 | -4.1 | -5.9 | 4.1e-09 | 0.52 | 0.05 | 0.23 | TRUE |
3 | GTEx | Prostate | SUOX | 0.22 | 0.04 | enet | 11 | 0.05 | 2.3e-02 | -4.1 | 5.6 | 2.1e-08 | -0.77 | 0.02 | 0.86 | FALSE |