TWAS
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Models
Genes
Traits
[Hub]/) :
Traits
:
Leg fat mass (left)
:
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→
chr2:15,703-1,384,725
Best TWAS P=1.42e-08 · Best GWAS P=7.22e-47 conditioned to 2.85e-40
0
0.2M
0.4M
0.6M
0.8M
1M
1.2M
1.4M
0
10
20
30
40
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
GTEx
Esophagus Muscularis
AC092159.2
0.26
0.16
enet
7
0.20
5.3e-12
4.9
5.7
1.4e-08
-0.30
1.00
0
TRUE
1
GTEx
Artery Tibial
AC092159.2
0.38
0.24
lasso
5
0.30
5.6e-24
4.9
5.6
2.7e-08
-0.19
1.00
0
FALSE
2
GTEx
Esophagus Muscularis
TMEM18
0.37
0.20
lasso
8
0.18
2.0e-11
4.9
5.4
5.9e-08
-0.28
1.00
0
FALSE
4
GTEx
Heart Left Ventricle
TMEM18
0.22
0.19
lasso
7
0.16
8.3e-09
3.6
5.1
2.9e-07
-0.19
0.99
0
FALSE