TWAS
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Traits
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Traits
:
Leg fat mass (left)
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chr2:14,610,061-16,399,845
Best TWAS P=8.1e-08 · Best GWAS P=7.66e-08 conditioned to 1
15M
15.5M
16M
16.5M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
GTEx
Heart Atrial Appendage
NBAS
0.29
0.11
lasso
5
0.17
3.1e-08
-5.2
5.4
8.1e-08
-0.97
0.06
0.94
TRUE
4
GTEx
Nerve Tibial
NBAS
0.11
0.09
lasso
4
0.07
2.1e-05
-5.3
-5.2
1.6e-07
0.97
0.06
0.94
FALSE
2
GTEx
Brain Cortex
NBAS
0.15
0.10
lasso
1
0.09
2.0e-03
-5.2
-5.2
2.2e-07
0.98
0.06
0.86
FALSE
5
GTEx
Thyroid
NBAS
0.08
0.05
lasso
3
0.05
1.9e-04
-4.8
-5.2
2.6e-07
0.90
0.07
0.93
FALSE
1
CommonMind
Brain Pre-frontal Cortex
NBAS
0.14
0.14
bslmm
685
0.16
2.0e-18
-5.2
-5.1
2.7e-07
0.94
0.06
0.94
FALSE