TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Leg fat mass (left)
:
←
→
chr5:126,596,610-128,116,643
Best TWAS P=4.83e-08 · Best GWAS P=1.78e-06 conditioned to 8.27e-06
126.6M
126.8M
127M
127.2M
127.4M
127.6M
127.8M
128M
128.2M
0
1
2
3
4
5
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Breast Invasive Carcinoma
FLJ33630
0.05
0.04
enet
14
0.03
2.1e-07
-4.5
5.5
4.8e-08
-0.06
0.00
0.96
TRUE
3
The Cancer Genome Atlas
Prostate Adenocarcinoma
FLJ33630
0.08
0.05
blup
70
0.04
4.4e-05
-4.2
5.4
5.7e-08
-0.10
0.00
0.93
FALSE
1
ROSMAP
Brain Pre-frontal Cortex
CTC-228N24.3
0.15
0.09
lasso
3
0.12
8.0e-15
-4.5
5.2
2.5e-07
-0.09
0.02
0.94
FALSE