Best TWAS P=5.62e-11 · Best GWAS P=1.06e-12 conditioned to 3.46e-07
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Vagina | PURA | 0.52 | 0.05 | enet | 51 | 0.09 | 0.0036 | 4.7 | -5.4 | 6.9e-08 | -0.41 | 0.05 | 0.15 | FALSE |
| 2 | YFS | Blood | CXXC5 | 0.01 | 0.00 | bslmm | 244 | 0.01 | 0.0026 | 6.7 | -6.5 | 5.6e-11 | -0.36 | 0.04 | 0.61 | TRUE |