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Traits
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Leg fat-free mass (left)
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chr12:45,890,331-47,465,082
Best TWAS P=8.12e-14 · Best GWAS P=1e-17 conditioned to 8e-05
45.8M
46M
46.2M
46.4M
46.6M
46.8M
47M
47.2M
47.4M
0
5
10
15
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
METSIM
Adipose
SLC38A2
0.02
0.02
blup
341
0.01
5.8e-03
-8.1
7.5
8.1e-14
-0.88
0.03
0.94
TRUE
2
NTR
Blood
SLC38A1
0.12
0.07
lasso
6
0.08
8.4e-24
5.4
-5.4
8.0e-08
0.02
1.00
0.00
TRUE
4
The Cancer Genome Atlas
Soft Tissue Sarcoma
SLC38A2
0.06
0.01
blup
30
0.03
5.1e-03
-8.3
7.5
8.2e-14
-0.89
0.02
0.66
FALSE
3
The Cancer Genome Atlas
Kidney Renal Papillary Cell Carcinoma
SLC38A2
0.10
0.06
blup
30
0.05
8.3e-04
-8.3
7.4
9.7e-14
-0.51
0.03
0.76
FALSE