Best TWAS P=1.76e-14 · Best GWAS P=1.95e-30 conditioned to 7.32e-18
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Breast Mammary Tissue (Male) | MRPL42 | 0.21 | -0.01 | lasso | 2 | -0.01 | 6.0e-01 | 7.9 | -7.7 | 1.8e-14 | -0.52 | 0.05 | 0.06 | TRUE |
2 | YFS | Blood | SOCS2 | 0.06 | 0.04 | bslmm | 444 | 0.04 | 1.7e-12 | 5.5 | 6.9 | 5.0e-12 | 0.02 | 1.00 | 0.00 | TRUE |