Best TWAS P=2.26e-09 · Best GWAS P=7.6e-10 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Aorta | ZNF638 | 0.25 | 0.07 | enet | 20 | 0.10 | 5.2e-06 | 6.1 | 6.0 | 2.3e-09 | 0.97 | 0.01 | 0.99 | TRUE |
2 | GTEx | Artery Tibial | ZNF638 | 0.10 | 0.06 | enet | 13 | 0.07 | 2.4e-06 | 6.2 | 5.6 | 2.0e-08 | 0.86 | 0.01 | 0.99 | FALSE |
3 | The Cancer Genome Atlas | Thyroid Carcinoma | ZNF638 | 0.08 | 0.05 | enet | 10 | 0.05 | 5.6e-06 | 6.1 | 5.8 | 5.6e-09 | 0.86 | 0.01 | 0.99 | FALSE |