Best TWAS P=6.76e-10 · Best GWAS P=2.65e-05 conditioned to 0.706
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adrenal Gland | SNUPN | 0.17 | 0.05 | enet | 17 | 0.11 | 1.3e-04 | -4 | 6.2 | 6.8e-10 | -0.63 | 0.01 | 0.08 | TRUE |
2 | GTEx | Adrenal Gland | PTPN9 | 0.29 | 0.04 | enet | 11 | 0.15 | 4.8e-06 | -4 | 5.5 | 3.1e-08 | -0.66 | 0.01 | 0.14 | FALSE |