TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Arm fat percentage (right)
:
←
→
chr18:38,837,001-40,365,619
Best TWAS P=4.96e-08 · Best GWAS P=1.37e-08 conditioned to 1
38.8M
39M
39.2M
39.4M
39.6M
39.8M
40M
40.2M
40.4M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Testis
PIK3C3
0.10
0.01
enet
24
0.02
4.8e-02
4.9
-5.5
5.0e-08
-0.39
0.14
0.14
TRUE
3
The Cancer Genome Atlas
Colon Adenocarcinoma
PIK3C3
0.09
0.04
lasso
8
0.03
6.0e-03
5.5
-5.2
2.6e-07
-0.98
0.02
0.90
TRUE
1
GTEx
Nerve Tibial
PIK3C3
0.16
0.12
enet
13
0.15
1.2e-10
4.6
-5.4
7.5e-08
-0.60
0.52
0.48
FALSE