Best TWAS P=4.48e-09 · Best GWAS P=4.37e-11 conditioned to 0.00133
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | PKHD1 | 0.04 | 0.05 | lasso | 3 | 0.05 | 1.7e-06 | 5.5 | -5.9 | 4.5e-09 | -0.78 | 0.38 | 0.62 | TRUE |