Best TWAS P=2.3e-07 · Best GWAS P=5.3e-07 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Esophagus Mucosa | AC092171.4 | 0.14 | 0.07 | lasso | 3 | 0.05 | 3.2e-04 | 5 | 5.2 | 2.3e-07 | 0.98 | 0 | 0.99 | TRUE |
2 | METSIM | Adipose | FBXL18 | 0.08 | 0.06 | lasso | 3 | 0.05 | 1.6e-07 | 5 | 5.2 | 2.4e-07 | 0.98 | 0 | 0.99 | FALSE |