Best TWAS P=1.66e-07 · Best GWAS P=1.66e-07 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | GBA2 | 0.07 | 0.03 | blup | 44 | 0.03 | 0.0111 | -3.4 | -5.2 | 2.0e-07 | 0.83 | 0.01 | 0.64 | FALSE |
| 2 | The Cancer Genome Atlas | Esophageal Carcinoma | GBA2 | 0.11 | 0.10 | lasso | 1 | 0.08 | 0.0018 | -5.2 | -5.2 | 1.7e-07 | 1.00 | 0.00 | 0.87 | TRUE |
| 3 | The Cancer Genome Atlas | Stomach Adenocarcinoma | GBA2 | 0.04 | 0.03 | blup | 44 | 0.02 | 0.0100 | -5.0 | -5.2 | 2.2e-07 | 0.92 | 0.01 | 0.88 | FALSE |