[Hub]/) : Traits : Arm fat-free mass (right) : ← →

chr6:85,673,386-87,086,122

Best TWAS P=5.18e-09 · Best GWAS P=9.93e-08 conditioned to 0.00511

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Artery Aorta SNHG5 0.49 0.56 enet 22 0.52 5.4e-33 4.8 -5.2 2.7e-07 0.26 0.18 0.81 FALSE
2 GTEx Brain Cerebellar Hemisphere SNHG5 0.13 0.10 lasso 5 0.09 2.8e-03 5.2 -5.1 3.0e-07 0.23 0.04 0.87 FALSE
3 GTEx Brain Nucleus accumbens basal ganglia PKMP3 0.12 0.16 lasso 5 0.11 7.6e-04 5.3 -5.2 2.4e-07 0.24 0.04 0.88 FALSE
4 GTEx Esophagus Gastroesophageal Junction SNHG5 0.29 0.34 lasso 3 0.34 7.3e-13 4.8 -5.8 5.2e-09 0.50 0.15 0.85 TRUE
5 GTEx Esophagus Muscularis SNHG5 0.40 0.53 enet 23 0.52 5.4e-36 4.8 -5.3 9.8e-08 0.34 0.17 0.82 FALSE
6 GTEx Liver SNHG5 0.47 0.42 enet 25 0.52 1.0e-16 4.8 -5.6 2.6e-08 0.34 0.08 0.91 FALSE
7 The Cancer Genome Atlas Cervical Squamous Cell Carcinoma SYNCRIP 0.07 0.04 blup 35 0.03 1.3e-02 4.9 5.7 1.4e-08 -0.33 0.02 0.77 FALSE
8 The Cancer Genome Atlas Uterine Corpus Endometrial Carcinoma SNHG5 0.58 0.58 enet 7 0.57 2.7e-19 4.8 -5.2 2.6e-07 0.23 0.01 0.98 FALSE