Best TWAS P=2.09e-07 · Best GWAS P=1.36e-08 conditioned to 0.000172
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Skin Not Sun Exposed Suprapubic | TRIM4 | 0.18 | 0.09 | enet | 17 | 0.13 | 1.8e-07 | 4.7 | -5.2 | 2.1e-07 | 0.45 | 0.16 | 0.82 | TRUE |
2 | GTEx | Whole Blood | TRIM4 | 0.12 | 0.05 | lasso | 5 | 0.06 | 5.9e-06 | 4.7 | -5.1 | 2.9e-07 | 0.47 | 0.12 | 0.86 | FALSE |