Best TWAS P=6.46e-16 · Best GWAS P=1.13e-13 conditioned to 0.879
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adipose Visceral Omentum | NLRX1 | 0.14 | 0.03 | lasso | 5 | 0.03 | 9.6e-03 | 7.3 | -8.1 | 6.5e-16 | -0.93 | 0.01 | 0.96 | TRUE |
2 | The Cancer Genome Atlas | Prostate Adenocarcinoma | TREH | 0.05 | 0.05 | lasso | 2 | 0.04 | 2.7e-05 | 5.2 | 5.2 | 1.8e-07 | 0.71 | 0.00 | 0.98 | FALSE |