Best TWAS P=6.3e-13 · Best GWAS P=1.48e-21 conditioned to 3.72e-10
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Breast Mammary Tissue (Female) | CERS5 | 0.09 | 0.03 | lasso | 3 | 0.05 | 0.01750 | 0.56 | -5.6 | 2.2e-08 | -0.53 | 0.05 | 0.22 | FALSE |
2 | GTEx | Testis | FAIM2 | 0.27 | 0.09 | lasso | 5 | 0.06 | 0.00093 | 7.79 | -7.2 | 6.3e-13 | -0.77 | 0.05 | 0.84 | TRUE |