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Arm fat-free mass (right)
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chr20:46,840,115-48,591,758
Best TWAS P=1.37e-08 · Best GWAS P=2.49e-08 conditioned to 1
46.8M
47M
47.2M
47.4M
47.6M
47.8M
48M
48.2M
48.4M
48.6M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
NTR
Blood
SNORD12B
0.03
0.05
lasso
8
0.05
1.9e-14
5.5
-5.7
1.4e-08
-0.98
0.01
0.99
TRUE
2
METSIM
Adipose
ARFGEF2
0.04
0.03
lasso
12
0.02
9.8e-05
5.4
-5.7
1.5e-08
-0.96
0.02
0.98
FALSE
4
The Cancer Genome Atlas
Brain Lower Grade Glioma
ARFGEF2
0.05
0.04
lasso
5
0.05
3.2e-06
5.1
-5.6
2.7e-08
-0.87
0.01
0.99
FALSE
5
The Cancer Genome Atlas
Ovarian Serous Cystadenocarcinoma
C20orf199
0.05
0.06
lasso
4
0.06
1.0e-04
5.5
5.5
3.0e-08
1.00
0.00
0.96
FALSE
1
GTEx
Testis
ARFGEF2
0.20
0.20
lasso
7
0.24
5.4e-11
4.6
-5.2
2.3e-07
-0.84
0.12
0.88
FALSE