Best TWAS P=1.47e-12 · Best GWAS P=1.81e-13 conditioned to 0.0077
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Esophagus Gastroesophageal Junction | CDKN2C | 0.14 | 0.11 | enet | 17 | 0.12 | 0.00003 | 7.4 | -7.1 | 1.5e-12 | -0.86 | 0.02 | 0.93 | TRUE |
| 2 | METSIM | Adipose | AGBL4 | 0.02 | 0.02 | lasso | 5 | 0.02 | 0.00126 | 5.7 | -5.8 | 5.9e-09 | 0.01 | 0.62 | 0.30 | TRUE |