Best TWAS P=9.56e-08 · Best GWAS P=6.95e-05 conditioned to 0.201
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | KCNA2 | 0.04 | 0 | blup | 87 | 0 | 0.21 | -3.8 | 5.3 | 9.6e-08 | -0.55 | 0 | 0.01 | TRUE |