Best TWAS P=5.65e-10 · Best GWAS P=1.29e-10 conditioned to 0.0804
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Adipose Visceral Omentum | VPS13C | 0.16 | 0.06 | enet | 15 | 0.05 | 9.2e-04 | 5.5 | 5.4 | 6.8e-08 | -0.67 | 0.39 | 0.39 | FALSE |
| 2 | GTEx | Skin Sun Exposed Lower leg | VPS13C | 0.09 | 0.09 | lasso | 2 | 0.08 | 1.8e-07 | 5.4 | 5.4 | 5.1e-08 | -0.84 | 0.38 | 0.62 | FALSE |
| 3 | GTEx | Spleen | VPS13C | 0.27 | 0.19 | lasso | 7 | 0.12 | 6.6e-04 | 5.0 | 5.5 | 4.3e-08 | -0.82 | 0.25 | 0.56 | FALSE |
| 4 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | C2CD4A | 0.09 | 0.11 | lasso | 1 | 0.08 | 9.4e-04 | -6.2 | -6.2 | 5.7e-10 | 0.94 | 0.02 | 0.82 | TRUE |