Best TWAS P=1.44e-07 · Best GWAS P=2.72e-06 conditioned to 0.758
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Breast Mammary Tissue (Female) | RABGAP1L | 0.19 | 0.00 | lasso | 3 | 0.01 | 0.20 | 4.5 | 5.3 | 1.4e-07 | 0.92 | 0.04 | 0.26 | TRUE |
2 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | RC3H1 | 0.13 | -0.01 | blup | 58 | 0.01 | 0.14 | 4.5 | 5.2 | 2.0e-07 | 0.80 | 0.00 | 0.08 | FALSE |