[Hub]/) : Traits : Arm fat percentage (left) :

chr1:7,715,776-9,571,422

Best TWAS P=9.46e-10 · Best GWAS P=1.78e-09 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous RERE 0.20 0.23 lasso 2 0.24 1.7e-19 4.9 5.5 3.4e-08 -0.77 0.22 0.78 FALSE
2 GTEx Adipose Subcutaneous RP5-1115A15.1 0.14 0.07 enet 20 0.10 2.6e-08 -5.9 5.4 8.3e-08 -0.88 0.00 1.00 FALSE
3 GTEx Adipose Visceral Omentum RERE 0.22 0.17 lasso 5 0.17 5.2e-09 -5.7 5.1 2.8e-07 -0.90 0.01 0.99 FALSE
4 GTEx Cells Transformed fibroblasts RERE 0.12 0.08 lasso 4 0.05 6.0e-05 5.3 5.3 1.0e-07 -0.67 0.08 0.91 FALSE
5 GTEx Esophagus Mucosa RERE 0.13 0.16 lasso 3 0.16 7.2e-11 -5.7 5.7 1.2e-08 -0.98 0.00 1.00 FALSE
6 GTEx Esophagus Mucosa RP5-1115A15.1 0.06 0.06 lasso 4 0.05 3.0e-04 -5.7 5.8 5.8e-09 -0.95 0.01 0.98 FALSE
7 GTEx Lung RERE 0.07 0.05 lasso 4 0.05 2.0e-04 -5.2 5.3 1.0e-07 -0.87 0.04 0.95 FALSE
8 GTEx Lung RP5-1115A15.1 0.05 0.08 lasso 1 0.07 1.0e-05 -5.9 5.9 3.1e-09 -1.00 0.00 1.00 FALSE
9 GTEx Skin Not Sun Exposed Suprapubic RP5-1115A15.1 0.08 0.04 enet 8 0.04 3.0e-03 -5.2 5.5 5.0e-08 -0.95 0.02 0.96 FALSE
10 GTEx Thyroid RP5-1115A15.1 0.09 0.12 lasso 2 0.09 1.5e-07 -5.9 6.0 2.7e-09 -0.99 0.00 1.00 FALSE
11 GTEx Whole Blood RERE 0.19 0.15 lasso 4 0.13 2.7e-12 -5.7 5.8 7.0e-09 -0.98 0.00 1.00 FALSE
12 METSIM Adipose RERE 0.08 0.12 lasso 17 0.13 1.8e-19 4.9 5.3 1.2e-07 -0.80 0.28 0.72 FALSE
13 ROSMAP Brain Pre-frontal Cortex RERE 0.15 0.15 lasso 7 0.15 1.5e-18 5.1 5.3 1.2e-07 -0.73 0.20 0.80 FALSE
14 YFS Blood RERE 0.09 0.15 lasso 4 0.16 5.7e-49 -6.0 6.1 9.5e-10 -0.98 0.00 1.00 TRUE
15 The Cancer Genome Atlas Breast Invasive Carcinoma RERE 0.02 0.03 lasso 2 0.03 4.7e-07 -6.0 5.9 4.5e-09 -0.98 0.00 1.00 FALSE
16 The Cancer Genome Atlas Pancreatic Adenocarcinoma RERE 0.22 0.04 lasso 10 0.08 4.1e-04 -5.7 6.0 2.2e-09 -0.90 0.01 0.97 FALSE