TWAS
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Models
Genes
Traits
[Hub]/) :
Traits
:
Arm fat mass (left)
:
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chr5:122,434,666-123,002,130
Best TWAS P=3.8e-09 · Best GWAS P=2.38e-12 conditioned to 2.59e-05
122.5M
122.6M
122.7M
122.8M
122.9M
123M
0
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4
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12
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Colon Adenocarcinoma
CEP120
0.06
0.02
blup
70
0.04
3.6e-03
4.5
5.9
3.8e-09
-0.64
0.10
0.29
TRUE
3
The Cancer Genome Atlas
Prostate Adenocarcinoma
CEP120
0.10
0.14
blup
70
0.14
2.6e-14
-6.3
5.3
1.2e-07
-0.83
0.07
0.93
FALSE
2
The Cancer Genome Atlas
Head and Neck Squamous Cell Carcinoma
CEP120
0.03
0.02
enet
5
0.04
7.3e-05
-2.9
5.3
1.3e-07
-0.66
0.03
0.82
FALSE