TWAS
hub
About
Usage
Models
Genes
Traits
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Traits
:
Arm fat mass (left)
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chr5:95,168,155-96,832,363
Best TWAS P=2.1e-10 · Best GWAS P=1.21e-08 conditioned to 2.44e-07
95.2M
95.4M
95.6M
95.8M
96M
96.2M
96.4M
96.6M
96.8M
0
2
4
6
8
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
GTEx
Liver
CAST
0.32
0.03
enet
23
0.12
4.4e-04
-4.9
-6.3
2.1e-10
-0.09
0.16
0.14
TRUE
2
GTEx
Esophagus Gastroesophageal Junction
ERAP1
0.29
0.18
lasso
8
0.13
2.6e-05
-4.7
-5.4
6.1e-08
-0.01
0.37
0.36
FALSE
1
GTEx
Colon Transverse
ERAP1
0.44
0.28
lasso
11
0.31
2.2e-15
-4.7
-5.2
1.8e-07
-0.02
0.39
0.61
FALSE
3
GTEx
Esophagus Muscularis
ERAP1
0.19
0.06
enet
19
0.11
2.5e-07
-3.7
-5.2
2.5e-07
-0.04
0.79
0.17
FALSE